# VirusVariantsWgsDailyIncomingData Schema ```txt https://covid19.admin.ch#/definitions/VirusVariantsWgsDailyIncomingData ``` Identified virus variants and sequencing results. | Abstract | Extensible | Status | Identifiable | Custom Properties | Additional Properties | Access Restrictions | Defined In | | :------------------ | ---------- | -------------- | ------------ | :---------------- | --------------------- | ------------------- | ----------------------------------------------------------------------------- | | Can be instantiated | No | Unknown status | No | Forbidden | Allowed | none | [sources.schema.json\*](../schema/sources.schema.json "open original schema") | ## VirusVariantsWgsDailyIncomingData Type `object` ([VirusVariantsWgsDailyIncomingData](sources-definitions-virusvariantswgsdailyincomingdata.md)) # VirusVariantsWgsDailyIncomingData Properties | Property | Type | Required | Nullable | Defined by | | :-------------------------------- | --------- | -------- | -------------- | :---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | | [classification](#classification) | `string` | Required | cannot be null | [COVID-19 Dashboard Source Data](sources-definitions-virusvariantswgsdailyincomingdata-properties-classification.md "https://covid19.admin.ch#/definitions/VirusVariantsWgsDailyIncomingData/properties/classification") | | [data_source](#data_source) | `string` | Required | cannot be null | [COVID-19 Dashboard Source Data](sources-definitions-virusvariantswgsdailyincomingdata-properties-data_source.md "https://covid19.admin.ch#/definitions/VirusVariantsWgsDailyIncomingData/properties/data_source") | | [date](#date) | `string` | Required | cannot be null | [COVID-19 Dashboard Source Data](sources-definitions-virusvariantswgsdailyincomingdata-properties-date.md "https://covid19.admin.ch#/definitions/VirusVariantsWgsDailyIncomingData/properties/date") | | [entries](#entries) | `number` | Optional | cannot be null | [COVID-19 Dashboard Source Data](sources-definitions-virusvariantswgsdailyincomingdata-properties-entries.md "https://covid19.admin.ch#/definitions/VirusVariantsWgsDailyIncomingData/properties/entries") | | [freq](#freq) | `number` | Required | cannot be null | [COVID-19 Dashboard Source Data](sources-definitions-virusvariantswgsdailyincomingdata-properties-freq.md "https://covid19.admin.ch#/definitions/VirusVariantsWgsDailyIncomingData/properties/freq") | | [geoRegion](#geoRegion) | `string` | Required | cannot be null | [COVID-19 Dashboard Source Data](sources-definitions-geounit.md "https://covid19.admin.ch#/definitions/VirusVariantsWgsDailyIncomingData/properties/geoRegion") | | [prct](#prct) | `number` | Required | cannot be null | [COVID-19 Dashboard Source Data](sources-definitions-virusvariantswgsdailyincomingdata-properties-prct.md "https://covid19.admin.ch#/definitions/VirusVariantsWgsDailyIncomingData/properties/prct") | | [prct_lower_ci](#prct_lower_ci) | `number` | Optional | cannot be null | [COVID-19 Dashboard Source Data](sources-definitions-virusvariantswgsdailyincomingdata-properties-prct_lower_ci.md "https://covid19.admin.ch#/definitions/VirusVariantsWgsDailyIncomingData/properties/prct_lower_ci") | | [prct_mean7d](#prct_mean7d) | `number` | Optional | cannot be null | [COVID-19 Dashboard Source Data](sources-definitions-virusvariantswgsdailyincomingdata-properties-prct_mean7d.md "https://covid19.admin.ch#/definitions/VirusVariantsWgsDailyIncomingData/properties/prct_mean7d") | | [prct_upper_ci](#prct_upper_ci) | `number` | Optional | cannot be null | [COVID-19 Dashboard Source Data](sources-definitions-virusvariantswgsdailyincomingdata-properties-prct_upper_ci.md "https://covid19.admin.ch#/definitions/VirusVariantsWgsDailyIncomingData/properties/prct_upper_ci") | | [sumTotal](#sumTotal) | `number` | Optional | cannot be null | [COVID-19 Dashboard Source Data](sources-definitions-virusvariantswgsdailyincomingdata-properties-sumtotal.md "https://covid19.admin.ch#/definitions/VirusVariantsWgsDailyIncomingData/properties/sumTotal") | | [timeframe_all](#timeframe_all) | `boolean` | Required | cannot be null | [COVID-19 Dashboard Source Data](sources-definitions-virusvariantswgsdailyincomingdata-properties-timeframe_all.md "https://covid19.admin.ch#/definitions/VirusVariantsWgsDailyIncomingData/properties/timeframe_all") | | [type](#type) | `string` | Required | cannot be null | [COVID-19 Dashboard Source Data](sources-definitions-virusvariantswgsdailyincomingdata-properties-type.md "https://covid19.admin.ch#/definitions/VirusVariantsWgsDailyIncomingData/properties/type") | | [variant_type](#variant_type) | `string` | Required | cannot be null | [COVID-19 Dashboard Source Data](sources-definitions-virusvariantwgstype.md "https://covid19.admin.ch#/definitions/VirusVariantsWgsDailyIncomingData/properties/variant_type") | | [version](#version) | `string` | Required | cannot be null | [COVID-19 Dashboard Source Data](sources-definitions-virusvariantswgsdailyincomingdata-properties-version.md "https://covid19.admin.ch#/definitions/VirusVariantsWgsDailyIncomingData/properties/version") | ## classification Classification of the variant_type default - default classification of all virus variants `classification` - is required - Type: `string` ([classification](sources-definitions-virusvariantswgsdailyincomingdata-properties-classification.md)) - cannot be null - defined in: [COVID-19 Dashboard Source Data](sources-definitions-virusvariantswgsdailyincomingdata-properties-classification.md "https://covid19.admin.ch#/definitions/VirusVariantsWgsDailyIncomingData/properties/classification") ### classification Type `string` ([classification](sources-definitions-virusvariantswgsdailyincomingdata-properties-classification.md)) ### classification Constraints **enum**: the value of this property must be equal to one of the following values: | Value | Explanation | | :---------- | ----------- | | `"default"` | | ## data_source DEPRECATED as of 05.07: will be removed in a future release. only 'wgs' records remain in the file. Data source for these records. msys - Targeted investigation of individual mutations or partial or complete sequencing of the genome reported from diagnostic laboratories via the mandatory declaration system. Data is mainly collected in the context of containment measures and is thus not representative. wgs - Identified virus variants and sequencing results from the genomic surveillance program. The genomic surveillance results are based on whole genome sequencing of SARS-CoV-2. A representative sample of all positive cases is sequenced (aim: 2000 samples/week) to have an overview of currently circulating virus variants and to estimate the proportion of individual variants. Not all laboratories participating in the program are technically connected for now, therefore the cantonal data is not representative. Only data for CHFL is published. `data_source` - is required - Type: `string` ([data_source](sources-definitions-virusvariantswgsdailyincomingdata-properties-data_source.md)) - cannot be null - defined in: [COVID-19 Dashboard Source Data](sources-definitions-virusvariantswgsdailyincomingdata-properties-data_source.md "https://covid19.admin.ch#/definitions/VirusVariantsWgsDailyIncomingData/properties/data_source") ### data_source Type `string` ([data_source](sources-definitions-virusvariantswgsdailyincomingdata-properties-data_source.md)) ### data_source Constraints **enum**: the value of this property must be equal to one of the following values: | Value | Explanation | | :------- | ----------- | | `"msys"` | | | `"wgs"` | | ## date Date of the provided data. Formatted as ISO-Date 2020-10-12 `date` - is required - Type: `string` ([date](sources-definitions-virusvariantswgsdailyincomingdata-properties-date.md)) - cannot be null - defined in: [COVID-19 Dashboard Source Data](sources-definitions-virusvariantswgsdailyincomingdata-properties-date.md "https://covid19.admin.ch#/definitions/VirusVariantsWgsDailyIncomingData/properties/date") ### date Type `string` ([date](sources-definitions-virusvariantswgsdailyincomingdata-properties-date.md)) ## entries Absolute number of occurrences for this day. `entries` - is optional - Type: `number` ([entries](sources-definitions-virusvariantswgsdailyincomingdata-properties-entries.md)) - cannot be null - defined in: [COVID-19 Dashboard Source Data](sources-definitions-virusvariantswgsdailyincomingdata-properties-entries.md "https://covid19.admin.ch#/definitions/VirusVariantsWgsDailyIncomingData/properties/entries") ### entries Type `number` ([entries](sources-definitions-virusvariantswgsdailyincomingdata-properties-entries.md)) ## freq Estimated percentage of the current virus variant for this day (values: 0-1). `freq` - is required - Type: `number` ([freq](sources-definitions-virusvariantswgsdailyincomingdata-properties-freq.md)) - cannot be null - defined in: [COVID-19 Dashboard Source Data](sources-definitions-virusvariantswgsdailyincomingdata-properties-freq.md "https://covid19.admin.ch#/definitions/VirusVariantsWgsDailyIncomingData/properties/freq") ### freq Type `number` ([freq](sources-definitions-virusvariantswgsdailyincomingdata-properties-freq.md)) ## geoRegion Geographical unit of the data records. May be either one of the top level Units CHFL, CH or FL for aggregated record sets or the canton of residence when available or the administrative canton i.e. the canton in which the case was diagnosed (if the place of residence is unknown or if the patient lives abroad). `geoRegion` - is required - Type: `string` ([GeoUnit](sources-definitions-geounit.md)) - cannot be null - defined in: [COVID-19 Dashboard Source Data](sources-definitions-geounit.md "https://covid19.admin.ch#/definitions/VirusVariantsWgsDailyIncomingData/properties/geoRegion") ### geoRegion Type `string` ([GeoUnit](sources-definitions-geounit.md)) ### geoRegion Constraints **enum**: the value of this property must be equal to one of the following values: | Value | Explanation | | :------- | ----------- | | `"AG"` | | | `"AI"` | | | `"AR"` | | | `"BE"` | | | `"BL"` | | | `"BS"` | | | `"CH"` | | | `"CH01"` | | | `"CH02"` | | | `"CH03"` | | | `"CH04"` | | | `"CH05"` | | | `"CH06"` | | | `"CH07"` | | | `"CHFL"` | | | `"FL"` | | | `"FR"` | | | `"GE"` | | | `"GL"` | | | `"GR"` | | | `"JU"` | | | `"LU"` | | | `"NE"` | | | `"NW"` | | | `"OW"` | | | `"SG"` | | | `"SH"` | | | `"SO"` | | | `"SZ"` | | | `"TG"` | | | `"TI"` | | | `"UR"` | | | `"VD"` | | | `"VS"` | | | `"ZG"` | | | `"ZH"` | | ## prct Estimated percentage of the current virus variant for this day (values: 0-100). `prct` - is required - Type: `number` ([prct](sources-definitions-virusvariantswgsdailyincomingdata-properties-prct.md)) - cannot be null - defined in: [COVID-19 Dashboard Source Data](sources-definitions-virusvariantswgsdailyincomingdata-properties-prct.md "https://covid19.admin.ch#/definitions/VirusVariantsWgsDailyIncomingData/properties/prct") ### prct Type `number` ([prct](sources-definitions-virusvariantswgsdailyincomingdata-properties-prct.md)) ## prct_lower_ci The daily 95 % multinomial proportion confidence interval of the 'prct' value was estimated with the two-sided Goodman method. prct_lower_ci represents the lower daily boundary. `prct_lower_ci` - is optional - Type: `number` ([prct_lower_ci](sources-definitions-virusvariantswgsdailyincomingdata-properties-prct_lower_ci.md)) - cannot be null - defined in: [COVID-19 Dashboard Source Data](sources-definitions-virusvariantswgsdailyincomingdata-properties-prct_lower_ci.md "https://covid19.admin.ch#/definitions/VirusVariantsWgsDailyIncomingData/properties/prct_lower_ci") ### prct_lower_ci Type `number` ([prct_lower_ci](sources-definitions-virusvariantswgsdailyincomingdata-properties-prct_lower_ci.md)) ## prct_mean7d Rolling 7 day average of the estimated percentage of the current virus variant for this day. `prct_mean7d` - is optional - Type: `number` ([prct_mean7d](sources-definitions-virusvariantswgsdailyincomingdata-properties-prct_mean7d.md)) - cannot be null - defined in: [COVID-19 Dashboard Source Data](sources-definitions-virusvariantswgsdailyincomingdata-properties-prct_mean7d.md "https://covid19.admin.ch#/definitions/VirusVariantsWgsDailyIncomingData/properties/prct_mean7d") ### prct_mean7d Type `number` ([prct_mean7d](sources-definitions-virusvariantswgsdailyincomingdata-properties-prct_mean7d.md)) ## prct_upper_ci The daily 95 % multinomial proportion confidence interval of the 'prct' value was estimated with two-sided Goodman method. prct_upper_ci represents the upper daily boundary. `prct_upper_ci` - is optional - Type: `number` ([prct_upper_ci](sources-definitions-virusvariantswgsdailyincomingdata-properties-prct_upper_ci.md)) - cannot be null - defined in: [COVID-19 Dashboard Source Data](sources-definitions-virusvariantswgsdailyincomingdata-properties-prct_upper_ci.md "https://covid19.admin.ch#/definitions/VirusVariantsWgsDailyIncomingData/properties/prct_upper_ci") ### prct_upper_ci Type `number` ([prct_upper_ci](sources-definitions-virusvariantswgsdailyincomingdata-properties-prct_upper_ci.md)) ## sumTotal Sum of the 'entries' values. `sumTotal` - is optional - Type: `number` ([sumTotal](sources-definitions-virusvariantswgsdailyincomingdata-properties-sumtotal.md)) - cannot be null - defined in: [COVID-19 Dashboard Source Data](sources-definitions-virusvariantswgsdailyincomingdata-properties-sumtotal.md "https://covid19.admin.ch#/definitions/VirusVariantsWgsDailyIncomingData/properties/sumTotal") ### sumTotal Type `number` ([sumTotal](sources-definitions-virusvariantswgsdailyincomingdata-properties-sumtotal.md)) ## timeframe_all Indicator if the record belongs to the timeframe for all available data. `timeframe_all` - is required - Type: `boolean` ([timeframe_all](sources-definitions-virusvariantswgsdailyincomingdata-properties-timeframe_all.md)) - cannot be null - defined in: [COVID-19 Dashboard Source Data](sources-definitions-virusvariantswgsdailyincomingdata-properties-timeframe_all.md "https://covid19.admin.ch#/definitions/VirusVariantsWgsDailyIncomingData/properties/timeframe_all") ### timeframe_all Type `boolean` ([timeframe_all](sources-definitions-virusvariantswgsdailyincomingdata-properties-timeframe_all.md)) ## type COVID19VirusVariants - identified virus variants and sequencing results `type` - is required - Type: `string` ([type](sources-definitions-virusvariantswgsdailyincomingdata-properties-type.md)) - cannot be null - defined in: [COVID-19 Dashboard Source Data](sources-definitions-virusvariantswgsdailyincomingdata-properties-type.md "https://covid19.admin.ch#/definitions/VirusVariantsWgsDailyIncomingData/properties/type") ### type Type `string` ([type](sources-definitions-virusvariantswgsdailyincomingdata-properties-type.md)) ### type Constraints **enum**: the value of this property must be equal to one of the following values: | Value | Explanation | | :----------------------- | ----------- | | `"COVID19VirusVariants"` | | ## variant_type Virus variant types. B.1.1.7 - All sequencing results identifying the variant B.1.1.7 (501Y.V1) B.1.351 - All sequencing results test identifying the variant B.1.351 (501Y.V2) B.1.525 - All sequencing results test identifying the variant B.1.525 B.1.526 - All sequencing results test identifying the variant B.1.526 B.1.617.1 - All sequencing results test identifying the variant B.1.617.1 B.1.617.2 - All sequencing results test identifying the variants B.1.617.2 and AY.1-AY.12 P.1 - All cases with a positive test identifying the variant P.1 (501Y.V3) P.2 - All cases with a positive test identifying the variant P.2 C.37 - All cases with a positive test identifying the variant C.37 B.1.1.318 - All cases with a positive test identifying the variant B.1.1.318 B.1.1.529 - All cases with a positive test identifying the variant B.1.1.529 other_lineages - All other lineages, not specifically monitored. all_sequenced - Sum of all sequencing results. Indicates how many samples were analyzed (per day/in total) `variant_type` - is required - Type: `string` ([VirusVariantWgsType](sources-definitions-virusvariantwgstype.md)) - cannot be null - defined in: [COVID-19 Dashboard Source Data](sources-definitions-virusvariantwgstype.md "https://covid19.admin.ch#/definitions/VirusVariantsWgsDailyIncomingData/properties/variant_type") ### variant_type Type `string` ([VirusVariantWgsType](sources-definitions-virusvariantwgstype.md)) ### variant_type Constraints **enum**: the value of this property must be equal to one of the following values: | Value | Explanation | | :------------------ | ----------- | | `"B.1.1.318"` | | | `"B.1.1.529"` | | | `"B.1.1.7"` | | | `"B.1.1.7 & E484K"` | | | `"B.1.351"` | | | `"B.1.525"` | | | `"B.1.526"` | | | `"B.1.617.1"` | | | `"B.1.617.2"` | | | `"C.37"` | | | `"P.1"` | | | `"P.2"` | | | `"all_sequenced"` | | | `"other_lineages"` | | ## version Timestamp of data processing. format YYYY-MM-DD_HH-mm-SS `version` - is required - Type: `string` ([version](sources-definitions-virusvariantswgsdailyincomingdata-properties-version.md)) - cannot be null - defined in: [COVID-19 Dashboard Source Data](sources-definitions-virusvariantswgsdailyincomingdata-properties-version.md "https://covid19.admin.ch#/definitions/VirusVariantsWgsDailyIncomingData/properties/version") ### version Type `string` ([version](sources-definitions-virusvariantswgsdailyincomingdata-properties-version.md))