VirusVariantsDailyIncomingData Schema

https://covid19.admin.ch#/definitions/VirusVariantsDailyIncomingData

Identified virus variants and sequencing results.

Abstract Extensible Status Identifiable Custom Properties Additional Properties Access Restrictions Defined In
Can be instantiated No Unknown status No Forbidden Allowed none sources.schema.json*

VirusVariantsDailyIncomingData Type

object (VirusVariantsDailyIncomingData)

VirusVariantsDailyIncomingData Properties

Property Type Required Nullable Defined by
anteil_pos number Optional cannot be null COVID-19 Dashboard Source Data
anteil_pos_mean7d number Optional cannot be null COVID-19 Dashboard Source Data
data_quality string Optional cannot be null COVID-19 Dashboard Source Data
data_source string Optional cannot be null COVID-19 Dashboard Source Data
date string Optional cannot be null COVID-19 Dashboard Source Data
entries number Optional cannot be null COVID-19 Dashboard Source Data
entries_neg number Optional cannot be null COVID-19 Dashboard Source Data
entries_pos number Optional cannot be null COVID-19 Dashboard Source Data
geoRegion string Optional cannot be null COVID-19 Dashboard Source Data
lower_ci_day number Optional cannot be null COVID-19 Dashboard Source Data
sumTotal number Optional cannot be null COVID-19 Dashboard Source Data
sumTotal_Phase2 number Optional cannot be null COVID-19 Dashboard Source Data
sumTotal_Phase2b number Optional cannot be null COVID-19 Dashboard Source Data
sumTotal_Phase3 number Optional cannot be null COVID-19 Dashboard Source Data
sumTotal_last14d number Optional cannot be null COVID-19 Dashboard Source Data
sumTotal_last28d number Optional cannot be null COVID-19 Dashboard Source Data
timeframe_14d boolean Optional cannot be null COVID-19 Dashboard Source Data
timeframe_28d boolean Optional cannot be null COVID-19 Dashboard Source Data
timeframe_all boolean Optional cannot be null COVID-19 Dashboard Source Data
timeframe_phase2 boolean Optional cannot be null COVID-19 Dashboard Source Data
timeframe_phase2b boolean Optional cannot be null COVID-19 Dashboard Source Data
timeframe_phase3 boolean Optional cannot be null COVID-19 Dashboard Source Data
type string Optional cannot be null COVID-19 Dashboard Source Data
upper_ci_day number Optional cannot be null COVID-19 Dashboard Source Data
variant_type string Optional cannot be null COVID-19 Dashboard Source Data
version string Optional cannot be null COVID-19 Dashboard Source Data
voc boolean Optional cannot be null COVID-19 Dashboard Source Data

anteil_pos

Estimated percentage of positive test results for this day. Only applies to variant_type 'voc_known' and 'voc_digitally_reported'.

anteil_pos

anteil_pos Type

number (anteil_pos)

anteil_pos_mean7d

Rolling 7 day average of the estimated percentage of positive test results for this day. Only applies to variant_type 'voc_known' and 'voc_digitally_reported'.

anteil_pos_mean7d

anteil_pos_mean7d Type

number (anteil_pos_mean7d)

data_quality

Indicates if the quality and quantity of the available data lends itself to calculate a reasonable percentage of variants of concern. In general the characterisation of variants before 30.01 was not widely enough established or digitally reported to BAG (i.e. negative results were not reported).

data_quality

data_quality Type

string (data_quality)

data_quality Constraints

enum: the value of this property must be equal to one of the following values:

Value Explanation
"insufficient"
"sufficient"

data_source

Data source for these records.

msys - Targeted investigation of individual mutations or partial or complete sequencing of the genome reported from diagnostic laboratories via the mandatory declaration system. Data is mainly collected in the context of containment measures and is thus not representative.

data_source

data_source Type

string (data_source)

data_source Constraints

enum: the value of this property must be equal to one of the following values:

Value Explanation
"msys"

date

Date of the provided data.

Formatted as ISO-Date 2020-10-12

date

date Type

string (date)

entries

Absolute number of occurrences for this day.

entries

entries Type

number (entries)

entries_neg

Absolute number of occurences of negative test results for this day. Only applies to variant_type 'voc_known' and 'voc_digitally_reported'.

entries_neg

entries_neg Type

number (entries_neg)

entries_pos

Absolute number of occurences of positive test results for this day. Only applies to variant_type 'voc_known' and 'voc_digitally_reported'.

entries_pos

entries_pos Type

number (entries_pos)

geoRegion

Geographical unit of the data records.

May be either one of the top level Units CHFL, CH or FL for aggregated record sets or the canton of residence when available or the administrative canton i.e. the canton in which the case was diagnosed (if the place of residence is unknown or if the patient lives abroad).

geoRegion

geoRegion Type

string (GeoUnit)

geoRegion Constraints

enum: the value of this property must be equal to one of the following values:

Value Explanation
"AG"
"AI"
"AR"
"BE"
"BL"
"BS"
"CH"
"CH01"
"CH02"
"CH03"
"CH04"
"CH05"
"CH06"
"CH07"
"CHFL"
"FL"
"FR"
"GE"
"GL"
"GR"
"JU"
"LU"
"NE"
"NW"
"OW"
"SG"
"SH"
"SO"
"SZ"
"TG"
"TI"
"UR"
"VD"
"VS"
"ZG"
"ZH"

lower_ci_day

The daily 95 % binomial proportion confidence interval of the anteil_pos was estimated with the Clopper and Pearson (1934) method. lower_ci_day represents the lower daily boundary. Only applies to variant_type 'voc_known' and 'voc_digitally_reported'.

lower_ci_day

lower_ci_day Type

number (lower_ci_day)

sumTotal

Sum of the 'entries' value since the beginning of the timeframe_all timeframe.

sumTotal

sumTotal Type

number (sumTotal)

sumTotal_Phase2

Sum of the 'entries' value since the beginning of the timeframe_phase2 timeframe.

sumTotal_Phase2

sumTotal_Phase2 Type

number (sumTotal_Phase2)

sumTotal_Phase2b

Sum of the 'entries' value since the beginning of the timeframe_phase2b timeframe.

sumTotal_Phase2b

sumTotal_Phase2b Type

number (sumTotal_Phase2b)

sumTotal_Phase3

Sum of the 'entries' value since the beginning of the timeframe_phase3 timeframe.

sumTotal_Phase3

sumTotal_Phase3 Type

number (sumTotal_Phase3)

sumTotal_last14d

Sum of identified cases since the beginning of the timeframe_14d timeframe.

Starts at 0 for the first day of the timeframe. Only available on records marked as belonging to the timeframe (timeframe_14d=true).

sumTotal_last14d

sumTotal_last14d Type

number (sumTotal_last14d)

sumTotal_last28d

Sum of the 'entries' value since the beginning of the timeframe_28d timeframe.

Starts at 0 for the first day of the timeframe. Only available on records marked as belonging to the timeframe (timeframe_28d=true).

sumTotal_last28d

sumTotal_last28d Type

number (sumTotal_last28d)

timeframe_14d

Indicator if the record belongs to the latest 14 days timeframe.

timeframe_14d

timeframe_14d Type

boolean (timeframe_14d)

timeframe_28d

Indicator if the record belongs to the latest 28 days timeframe.

timeframe_28d

timeframe_28d Type

boolean (timeframe_28d)

timeframe_all

Indicator if the record belongs to the timeframe for all available data.

timeframe_all

timeframe_all Type

boolean (timeframe_all)

timeframe_phase2

Indicator if the record belongs to the phase 2 timeframe. Starts at 08.06.2020 (Iso-Week 2020-24).

timeframe_phase2

timeframe_phase2 Type

boolean (timeframe_phase2)

timeframe_phase2b

Indicator if the record belongs to the phase 2b timeframe. Starts at 28.09.2020 (Iso-Week 2020-40).

timeframe_phase2b

timeframe_phase2b Type

boolean (timeframe_phase2b)

timeframe_phase3

Indicator if the record belongs to the phase 3 timeframe. Starts at 15.02.2020 (Iso-Week 2021-09).

timeframe_phase3

timeframe_phase3 Type

boolean (timeframe_phase3)

type

COVID19VirusVariants - identified virus variants and sequencing results

type

type Type

string (type)

type Constraints

enum: the value of this property must be equal to one of the following values:

Value Explanation
"COVID19VirusVariants"

upper_ci_day

The daily 95 % binomial proportion confidence interval of the anteil_pos was estimated with the Clopper and Pearson (1934) method. upper_ci_day represents the upper daily boundary. Only applies to variant_type 'voc_known' and 'voc_digitally_reported'.

upper_ci_day

upper_ci_day Type

number (upper_ci_day)

variant_type

Virus variant types.

voc_pos - All positive tests identified as a variant of concern
voc_known - All sequencing results reported by laboratories including both positive and negative results for all variants of concern. For this variant_type, especially in the beginning of the surveillance, there are only positive but not negative results available. Therefore anteil_pos is not available in this structure.
voc_digitally_reported - All sequencing results reported digitally by laboratories including both positive and negative results for all variants of concern. For this variant_type, the period where a lab has reported only positives but not negatives was excluded. Therefore anteil_pos is available in this structure.
B.1.1.7 - All cases with a positive test identifying the variant B.1.1.7 (501Y.V1)
B.1.1.7 & E484K - All cases with a positive test identifying the variant B.1.1.7 and E484K mutation
B.1.351 - All cases with a positive test identifying the variant B.1.351 (501Y.V2)
B.1.617 - All cases with a positive test identifying the variant B.1.617
P.1 - All cases with a positive test identifying the variant P.1 (501Y.V3)
P.2 - All cases with a positive test identifying the variant P.2
S:N501Y - All cases with a positive test identifying the mutation S:N501Y. This does not include variants that have been identified in detail (B.1.1.7, B.1.351 or P.1)
S:N501Y_E484K - All cases with a positive test identifying the mutation S:N501Y and E484K. This does not include variants that have been identified in detail (B.1.1.7, B.1.351 or P.1) and cases for which only the S:N501Y mutation has been identified.

variant_type

variant_type Type

string (VirusVariantType)

variant_type Constraints

enum: the value of this property must be equal to one of the following values:

Value Explanation
"B.1.1.7"
"B.1.1.7 & E484K"
"B.1.351"
"B.1.617"
"P.1"
"P.2"
"S:N501Y"
"S:N501Y_E484K"
"voc_digitally_reported"
"voc_known"
"voc_pos"

version

Timestamp of data processing.

format YYYY-MM-DD_HH-mm-SS

version

version Type

string (version)

voc

True if the virus variant_type refers to a variant of concern, false if not.

voc

voc Type

boolean (voc)